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Clinical Protocols

Treatment protocols, supplement stacks, daily routines, and preparation guides. Evidence-based frameworks from clinical practice — not prescriptions.

19 articles · 109 min total reading time

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Clinical Protocol Templates

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Articles

19 articles
Managing Herxheimer Reactions at Home
Infectiology

Managing Herxheimer Reactions at Home

Evidence-based strategies for managing Jarisch-Herxheimer reactions during Lyme treatment — hydration, detox support, dose pacing, and when to call your doctor.

Apr 1, 2026 · 8 min read
How to Increase Deep Sleep Naturally: A Physician's Protocol
Longevity

How to Increase Deep Sleep Naturally: A Physician's Protocol

Evidence-based protocol to increase deep sleep and slow-wave sleep. Temperature, light, exercise timing, supplements, and what actually works according to sleep research.

Apr 1, 2026 · 8 min read
BPC-157 Dosage Guide: Subcutaneous, Oral, and Injection Protocols
Peptides

BPC-157 Dosage Guide: Subcutaneous, Oral, and Injection Protocols

Evidence-based BPC-157 dosing protocols. Subcutaneous vs oral routes, loading vs maintenance, body weight calculations, and clinical observations.

Apr 1, 2026 · 10 min read
GHK-Cu Dosage: Topical, Injection, and Combination Protocols
Peptides

GHK-Cu Dosage: Topical, Injection, and Combination Protocols

Complete GHK-Cu dosing guide. Topical concentrations, subcutaneous injection protocols, microneedling delivery, and combination strategies.

Apr 1, 2026 · 8 min read
Thymosin Alpha-1 Dosage and Protocol
Peptides

Thymosin Alpha-1 Dosage and Protocol

Evidence-based Thymosin Alpha-1 dosing. Subcutaneous protocols for immune support, cancer adjunct, infection, and chronic disease applications.

Apr 1, 2026 · 7 min read
NAC vs. Glutathione: Which Antioxidant Should You Take?
Supplements

NAC vs. Glutathione: Which Antioxidant Should You Take?

Physician comparison of NAC vs glutathione supplements. Oral bioavailability, mechanisms, when to use each, liposomal glutathione, and evidence-based recommendations.

Apr 1, 2026 · 6 min read
Building Your Longevity Stack
Longevity

Building Your Longevity Stack

Evidence-tiered approach to longevity supplements. What works, what might work, and what to skip -- from a physician's perspective.

Mar 28, 2026 · 5 min read
Peptide Therapy for Lyme Disease
Peptides

Peptide Therapy for Lyme Disease

How Dr. Julian Douwes uses peptides in chronic Lyme disease treatment. Thymosin alpha-1, LL-37, BPC-157 protocols alongside standard Lyme therapy.

Mar 28, 2026 · 7 min read
Anti-Inflammation Protocol
Protocols

Anti-Inflammation Protocol

A physician's evidence-based protocol for reducing chronic inflammation through diet, lifestyle, and targeted supplementation.

Mar 28, 2026 · 2 min read
Cognitive Performance Protocol
Protocols

Cognitive Performance Protocol

Evidence-based protocol for mental clarity, focus, and memory from a physician who treats cognitive dysfunction daily.

Mar 28, 2026 · 3 min read
Gentle Detoxification Protocol
Protocols

Gentle Detoxification Protocol

A physician's approach to supporting liver, lymph, and toxin elimination through diet, supplements, and lifestyle. By Dr. Julian Douwes.

Mar 28, 2026 · 5 min read
30-Day Gut Reset Protocol
Protocols

30-Day Gut Reset Protocol

A structured four-phase protocol for gut restoration -- remove, repair, reinoculate, maintain. Evidence-based by Dr. Julian Douwes.

Mar 28, 2026 · 9 min read
Immune Support Protocol: Seasonal and Travel
Protocols

Immune Support Protocol: Seasonal and Travel

A tiered protocol for immune support -- seasonal prevention, pre-travel preparation, and acute illness response. By Dr. Julian Douwes.

Mar 28, 2026 · 4 min read
Lyme Support Protocol: Between Treatments
Protocols

Lyme Support Protocol: Between Treatments

A supplement and lifestyle protocol for Lyme disease patients between clinical treatments. Evidence levels included. By Dr. Julian Douwes.

Mar 28, 2026 · 5 min read
Morning Protocol: Cold, Light, and Supplements
Protocols

Morning Protocol: Cold, Light, and Supplements

Dr. Julian Douwes' personal morning protocol -- cold exposure, morning light, and foundational supplements with evidence levels.

Mar 28, 2026 · 5 min read
Post-COVID Recovery Protocol
Protocols

Post-COVID Recovery Protocol

An evidence-based recovery protocol addressing inflammation, clotting, energy, and immune regulation after COVID-19. By Dr. Julian Douwes.

Mar 28, 2026 · 5 min read
Pre-Treatment Preparation Protocol
Protocols

Pre-Treatment Preparation Protocol

How to prepare your body before traveling to St. George Hospital for Lyme, Post-COVID, or integrative cancer treatment.

Mar 28, 2026 · 3 min read
Sleep Optimization Protocol
Protocols

Sleep Optimization Protocol

Evidence-based strategies for improving sleep quality -- environment, timing, supplements, and habits. By Dr. Julian Douwes.

Mar 28, 2026 · 5 min read
Travel Health Protocol: Immune and Gut Support
Protocols

Travel Health Protocol: Immune and Gut Support

A physician's travel protocol for immune support, jet lag management, and gut protection. Evidence-based recommendations by Dr. Julian Douwes.

Mar 28, 2026 · 4 min read

Complete Guide

Evidence-Based Protocols: A Physician's Approach

In-depth reference by Dr. Julian Douwes

Evidence-Based Protocols: A Physician’s Approach

By Dr. Julian Douwes, M.D. — Chief Medical Officer, Klinik St. Georg


Protocols are a framework, not a prescription. I want to be clear about this distinction before presenting any protocol on this site.

A protocol is a structured approach to a health goal — supporting immune function, optimizing sleep, preparing for treatment, recovering from illness. It combines lifestyle modifications, dietary adjustments, and targeted supplementation into a coherent sequence. When designed well, a protocol reflects the best available evidence, acknowledges uncertainty, and provides a practical starting point that individuals can adapt to their circumstances.

A prescription is a specific medical intervention tailored to a specific patient by a physician who has examined them, reviewed their history, and considered their individual risk factors. Protocols cannot replace prescriptions. They can inform the conversations you have with your physician about what might be useful in your case.


How I Design Protocols

Evidence Stratification

Every supplement recommendation in my protocols includes an evidence level. This is non-negotiable. Patients deserve to know whether a recommendation is based on multiple randomized controlled trials or on my clinical observation. Both have value, but they carry different weight.

I use the following framework:

LevelDescriptionExample
StrongMultiple RCTs, meta-analyses, or systematic reviewsVitamin D for immune function, omega-3 for inflammation
ModerateControlled human studies, smaller RCTs, consistent observational dataCurcumin for NF-kB inhibition, berberine for metabolic health
EmergingPreliminary human data, strong mechanistic rationale, early clinical trialsCertain peptides, specific probiotic strains for novel indications
TraditionalLong historical use, mechanistic plausibility, limited modern clinical dataAdaptogenic herbs, some traditional botanical preparations
PreclinicalAnimal studies only, laboratory data; human translation uncertainMany novel compounds discussed in biohacking communities

When I include a supplement with emerging or traditional evidence, I say so explicitly. When I include something with strong evidence, I cite the specific studies or categories of evidence supporting it. The difference matters.

The Hierarchy of Intervention

In every protocol, lifestyle and dietary interventions come first. Supplements come second. Advanced interventions come third.

This order reflects both the evidence base and clinical reality:

  1. Lifestyle foundations — sleep, exercise, stress management, dietary pattern — have the strongest evidence for health outcomes and cost nothing. They are also the hardest to implement consistently, which is why they often need the most attention.

  2. Targeted supplementation — fills specific gaps, addresses specific mechanisms, supports the body during periods of increased demand. Supplements work best when the foundations are in place. A sleep supplement is a poor substitute for fixing the light environment and stress levels that are actually causing the insomnia.

  3. Advanced interventions — IV therapies, peptides, prescription medications, clinical treatments. These require physician supervision, are more expensive, and carry more risk. They should be reserved for situations where foundations and supplementation are insufficient.

I see too many protocols that skip straight to exotic supplements while ignoring the fact that the patient sleeps five hours, eats processed food, and is chronically stressed. The supplements will not work optimally in that context.

Individualization

Every protocol on this site is a general framework. Individual variation plays a significant role in how any person responds to any intervention. Factors that influence response include:

  • Genetics — methylation status (MTHFR variants), detoxification capacity (CYP enzyme polymorphisms), nutrient metabolism
  • Current health status — existing conditions, medications, nutrient levels
  • Gut health — absorption capacity, microbiome composition, intestinal permeability
  • Age and sex — hormonal status, metabolic rate, body composition
  • Stress load — HPA axis function, cortisol levels, autonomic balance

This is why I recommend testing before supplementing when possible. A protocol designed around your specific lab results will produce better outcomes than a generic protocol applied without context.


What These Protocols Are Not

They are not prescriptions. I am sharing frameworks based on evidence and clinical experience. They are not a substitute for working with a physician who knows your case.

They are not medical advice for specific conditions. If you have a diagnosed medical condition, your treatment should be managed by a physician. These protocols may complement that treatment, but they should not replace it.

They are not sales pitches. I do not sell supplements. The brands I mention (when I mention specific brands) are based on quality and evidence, not financial relationships.

They are not guaranteed to work. Individual variation means that what works for 80% of patients may not work for you. If a protocol does not produce improvement within the expected timeframe, that is valuable information — it means the protocol needs adjustment or the underlying issue is different from what was assumed.


The Available Protocols

Daily and Lifestyle

Gut and Metabolic

Immune and Inflammatory

Travel and Preparation


A Final Note

The best protocol is the one you actually follow. I have seen elaborate supplement regimens abandoned after two weeks because they were impractical. I have also seen simple protocols — good sleep, consistent exercise, three well-chosen supplements — produce remarkable results because the patient maintained them for months.

Start with what is sustainable. Build from there. Measure your progress. Adjust based on results, not assumptions.


Disclaimer: These protocols are provided for educational purposes and reflect one physician’s clinical approach. They are not a substitute for individualized medical care. Consult a qualified physician before beginning any new supplement protocol, particularly if you have existing medical conditions or are taking medications.